Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DXD04_01515 | Not Available | Negative | 358787 - 359356 | 22589.1 |
| susc/raga family tonb-linked outer membrane protein | DXD04_01520 | Not Available | Positive | 359785 - 363240 | 128203.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_01525 | Not Available | Positive | 363274 - 364824 | 58505.3 |
| gfo/idh/moca family oxidoreductase | DXD04_01530 | Not Available | Positive | 364845 - 366251 | 53393.3 |
| glycosyl hydrolase | DXD04_01535 | Not Available | Positive | 366331 - 368901 | 95543.2 |
| hypothetical protein | DXD04_01540 | Not Available | Negative | 368950 - 369339 | 15224.5 |
| xre family transcriptional regulator | DXD04_01545 | Not Available | Positive | 369433 - 369987 | 20747.0 |
| acetyl-coa synthetase | DXD04_01550 | Not Available | Positive | 370009 - 371664 | 62486.4 |
| chondroitinase | DXD04_01555 | Not Available | Positive | 371721 - 374789 | 115798.0 |
| nad kinase | DXD04_01560 | Not Available | Negative | 374872 - 375744 | 32720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

