Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-grasp domain-containing protein | DXD04_15705 | Not Available | Negative | 3777295 - 3778293 | 37592.5 |
| diaminopimelate decarboxylase | DXD04_15710 | Not Available | Negative | 3778295 - 3779479 | 45269.5 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | DXD04_15715 | Not Available | Negative | 3779460 - 3780587 | 42047.9 |
| legc family aminotransferase | DXD04_15720 | Not Available | Negative | 3780592 - 3781740 | 43228.4 |
| nucleoside-diphosphate sugar epimerase | DXD04_15725 | Not Available | Negative | 3781748 - 3782956 | 46284.2 |
| chondroitinase | DXD04_15730 | Not Available | Positive | 3783314 - 3786148 | 107913.0 |
| glucuronyl hydrolase | DXD04_15735 | Not Available | Positive | 3786241 - 3787473 | 47138.5 |
| arylsulfatase | DXD04_15740 | Not Available | Positive | 3787518 - 3789041 | 58347.5 |
| hypothetical protein | DXD04_15745 | Not Available | Negative | 3789110 - 3789445 | 12780.6 |
| thioredoxin | DXD04_15750 | Not Available | Negative | 3789463 - 3789780 | 11552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

