Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | DXD04_15600 | Not Available | Positive | 3754702 - 3756735 | 79512.7 |
| m20/m25/m40 family metallo-hydrolase | DXD04_15610 | Not Available | Positive | 3757314 - 3758861 | 58182.8 |
| thioredoxin | DXD04_15615 | Not Available | Positive | 3758959 - 3760860 | 71460.5 |
| hypothetical protein | DXD04_15620 | Not Available | Negative | 3761069 - 3761290 | 8595.66 |
| nad-dependent epimerase/dehydratase family protein | DXD04_15625 | Not Available | Negative | 3761438 - 3761598 | 6011.27 |
| hypothetical protein | DXD04_15630 | Not Available | Negative | 3761691 - 3762134 | 17201.6 |
| hypothetical protein | DXD04_15635 | Not Available | Negative | 3762149 - 3763636 | 55846.0 |
| chain-length determining protein | DXD04_15640 | Not Available | Negative | 3763651 - 3764742 | 40838.5 |
| glycosyltransferase family 2 protein | DXD04_15645 | Not Available | Negative | 3764979 - 3765827 | 32995.4 |
| glycosyltransferase | DXD04_15650 | Not Available | Negative | 3765829 - 3766941 | 43214.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

