Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DXD04_15540 | Not Available | Negative | 3742506 - 3743909 | 54761.7 |
| dna primase | DXD04_15545 | Not Available | Negative | 3744121 - 3745080 | 37009.0 |
| mobilization protein | DXD04_15550 | Not Available | Negative | 3745297 - 3746373 | 41097.6 |
| duf3853 family protein | DXD04_15555 | Not Available | Negative | 3746388 - 3746696 | 11129.7 |
| hypothetical protein | DXD04_15560 | Not Available | Negative | 3746920 - 3747939 | 40600.0 |
| duf1016 family protein | DXD04_15565 | Not Available | Negative | 3747950 - 3749242 | 49156.8 |
| site-specific integrase | DXD04_15570 | Not Available | Negative | 3749309 - 3750592 | 50445.3 |
| dde transposase | DXD04_15575 | Not Available | Negative | 3750932 - 3751867 | 36499.1 |
| hypothetical protein | DXD04_15580 | Not Available | Negative | 3751911 - 3752252 | 13333.0 |
| duf262 domain-containing protein | DXD04_15595 | Not Available | Positive | 3753179 - 3754696 | 58622.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

