Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein beta subunit/fixa family protein | DXD04_15485 | Not Available | Negative | 3732396 - 3733283 | 31577.9 |
| mechanosensitive ion channel family protein | DXD04_15495 | Not Available | Positive | 3733450 - 3734664 | 45951.6 |
| dihydrolipoamide acyltransferase | DXD04_15500 | Not Available | Positive | 3734671 - 3735039 | 12916.5 |
| transporter | DXD04_15505 | Not Available | Negative | 3735367 - 3736965 | 56659.9 |
| glycosyl hydrolase | DXD04_15510 | Not Available | Negative | 3737067 - 3739424 | 88996.6 |
| hypothetical protein | DXD04_15515 | Not Available | Positive | 3739499 - 3739751 | 9352.37 |
| macrolide efflux mfs transporter mef(en2) | DXD04_15520 | Not Available | Positive | 3739876 - 3741081 | 44135.4 |
| lincosamide nucleotidyltransferase lnu(an2) | DXD04_15525 | Not Available | Positive | 3741106 - 3741618 | 19690.2 |
| hypothetical protein | DXD04_15530 | Not Available | Positive | 3741629 - 3741835 | 7306.68 |
| steroid delta-isomerase | DXD04_15535 | Not Available | Negative | 3742064 - 3742417 | 13706.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

