Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXD04_15435 | Not Available | Positive | 3718503 - 3720851 | 89485.0 |
| abc transporter permease | DXD04_15440 | Not Available | Positive | 3720886 - 3723270 | 90193.5 |
| hypothetical protein | DXD04_15445 | Not Available | Negative | 3723517 - 3723933 | 16519.6 |
| hypothetical protein | DXD04_15450 | Not Available | Negative | 3724124 - 3724525 | 14818.6 |
| sigma-70 family rna polymerase sigma factor | DXD04_15455 | Not Available | Positive | 3724657 - 3725202 | 21316.3 |
| hypothetical protein | DXD04_15460 | Not Available | Positive | 3725206 - 3725568 | 14587.1 |
| polysaccharide lyase | DXD04_15465 | Not Available | Negative | 3725574 - 3728027 | 92667.0 |
| acyl-coa dehydrogenase | DXD04_15470 | Not Available | Negative | 3728788 - 3730494 | 64076.1 |
| tonb family protein | DXD04_15475 | Not Available | Negative | 3730507 - 3731355 | 33200.6 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DXD04_15480 | Not Available | Negative | 3731371 - 3732390 | 36962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

