Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam mobile pair protein a | DXD04_15385 | Not Available | Positive | 3704323 - 3704991 | 26048.5 |
| radical sam mobile pair protein b | DXD04_15390 | Not Available | Positive | 3704988 - 3705863 | 33883.9 |
| mobilization protein | DXD04_15395 | Not Available | Negative | 3706010 - 3707413 | 54617.6 |
| dna primase | DXD04_15400 | Not Available | Negative | 3707696 - 3708652 | 36371.1 |
| mobilization protein | DXD04_15405 | Not Available | Negative | 3708864 - 3709931 | 40522.6 |
| duf3853 family protein | DXD04_15410 | Not Available | Negative | 3709943 - 3710251 | 11297.9 |
| hypothetical protein | DXD04_15415 | Not Available | Negative | 3710473 - 3711537 | 42146.3 |
| duf1016 family protein | DXD04_15420 | Not Available | Negative | 3711550 - 3712836 | 48663.1 |
| site-specific integrase | DXD04_15425 | Not Available | Negative | 3712900 - 3714183 | 50283.2 |
| beta-n-acetylglucosaminidase | DXD04_15430 | Not Available | Positive | 3714536 - 3717097 | 96505.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

