Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | DXD04_15285 | Not Available | Positive | 3681934 - 3683643 | 63544.2 |
| phospho-sugar mutase | DXD04_15290 | Not Available | Negative | 3684522 - 3686267 | 64433.4 |
| m23 family peptidase | DXD04_15295 | Not Available | Positive | 3686436 - 3688097 | 62620.4 |
| dipeptidase | DXD04_15300 | Not Available | Positive | 3688140 - 3689789 | 62144.9 |
| phosphate starvation-inducible protein phoh | DXD04_15305 | Not Available | Positive | 3689881 - 3690879 | 37149.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DXD04_15310 | Not Available | Positive | 3690921 - 3691868 | 35940.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DXD04_15315 | Not Available | Positive | 3691947 - 3692687 | 27939.0 |
| shikimate dehydrogenase | DXD04_15320 | Not Available | Positive | 3692706 - 3693449 | 27788.6 |
| alpha/beta hydrolase | DXD04_15325 | Not Available | Positive | 3693463 - 3694416 | 36141.5 |
| Trna-trp | Not Available | Not Available | Positive | 3694617 - 3694692 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

