Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DXD04_15185 | Not Available | Positive | 3651323 - 3654541 | 121371.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_15190 | Not Available | Positive | 3654567 - 3655982 | 53493.7 |
| ahpc/tsa family protein | DXD04_15195 | Not Available | Positive | 3655991 - 3657166 | 43570.5 |
| phosphoribosylformylglycinamidine synthase | DXD04_15200 | Not Available | Negative | 3657401 - 3661108 | 137487.0 |
| anaerobic c4-dicarboxylate transporter | DXD04_15205 | Not Available | Positive | 3661253 - 3662563 | 45954.0 |
| lyse family translocator | DXD04_15210 | Not Available | Positive | 3662832 - 3663491 | 24058.4 |
| duf4924 family protein | DXD04_15215 | Not Available | Positive | 3663498 - 3664043 | 21264.1 |
| dtdp-4-dehydrorhamnose reductase | DXD04_15220 | Not Available | Positive | 3664057 - 3664914 | 31971.1 |
| peptide chain release factor 3 | DXD04_15225 | Not Available | Positive | 3664917 - 3666488 | 59844.5 |
| mate family efflux transporter | DXD04_15230 | Not Available | Negative | 3666557 - 3667888 | 49609.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

