Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_15135 | Not Available | Negative | 3640952 - 3641800 | 33575.3 |
| alpha/beta fold hydrolase | DXD04_15140 | Not Available | Negative | 3641820 - 3643064 | 46280.4 |
| hypothetical protein | DXD04_15145 | Not Available | Negative | 3643061 - 3643639 | 22335.7 |
| padr family transcriptional regulator | DXD04_15150 | Not Available | Negative | 3643647 - 3643970 | 12496.5 |
| dihydrofolate reductase | DXD04_15155 | Not Available | Negative | 3644133 - 3644645 | 19395.6 |
| duf2441 domain-containing protein | DXD04_15160 | Not Available | Positive | 3645405 - 3645911 | 20483.2 |
| hypothetical protein | DXD04_15165 | Not Available | Positive | 3646070 - 3646940 | 33490.8 |
| arginase family protein | DXD04_15170 | Not Available | Positive | 3647047 - 3647838 | 30102.3 |
| branched-chain amino acid aminotransferase | DXD04_15175 | Not Available | Negative | 3647920 - 3648939 | 37820.2 |
| arac family transcriptional regulator | DXD04_15180 | Not Available | Positive | 3649354 - 3651126 | 68565.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

