Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3945 domain-containing protein | DXD04_15085 | Not Available | Positive | 3624498 - 3625859 | 51614.5 |
| type ia dna topoisomerase | DXD04_15090 | Not Available | Positive | 3625877 - 3627973 | 78562.1 |
| duf2958 domain-containing protein | DXD04_15095 | Not Available | Positive | 3627986 - 3634171 | 234070.0 |
| hypothetical protein | DXD04_15100 | Not Available | Negative | 3634257 - 3635783 | 60305.7 |
| hypothetical protein | DXD04_15105 | Not Available | Negative | 3636369 - 3636842 | 18087.6 |
| duf4065 domain-containing protein | DXD04_15110 | Not Available | Negative | 3636836 - 3637570 | 28350.8 |
| dna-binding protein | DXD04_15115 | Not Available | Negative | 3637530 - 3637802 | 10458.8 |
| bifunctional dna primase/helicase | DXD04_15120 | Not Available | Negative | 3637799 - 3639859 | 78300.3 |
| dna-binding protein | DXD04_15125 | Not Available | Negative | 3639825 - 3640232 | 15867.9 |
| xre family transcriptional regulator | DXD04_15130 | Not Available | Negative | 3640242 - 3640574 | 12501.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

