Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | DXD04_15030 | Not Available | Positive | 3610494 - 3611225 | 27988.5 |
| outer membrane protein assembly factor bama | DXD04_15035 | Not Available | Positive | 3611235 - 3613886 | 101551.0 |
| omph family outer membrane protein | DXD04_15040 | Not Available | Positive | 3613906 - 3614421 | 19230.2 |
| omph family outer membrane protein | DXD04_15045 | Not Available | Positive | 3614502 - 3615056 | 21017.2 |
| glutamate racemase | DXD04_15050 | Not Available | Positive | 3615160 - 3616005 | 31779.4 |
| beta-glucosidase bglx | DXD04_15055 | Not Available | Negative | 3616075 - 3618312 | 81787.2 |
| hypothetical protein | DXD04_15060 | Not Available | Negative | 3618684 - 3619412 | 27570.4 |
| is21 family transposase | DXD04_15065 | Not Available | Negative | 3619413 - 3621020 | 62071.3 |
| hypothetical protein | DXD04_15070 | Not Available | Positive | 3621544 - 3622755 | 47784.4 |
| hypothetical protein | DXD04_15080 | Not Available | Positive | 3623619 - 3624371 | 28768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

