Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | DXD04_14980 | Not Available | Negative | 3595276 - 3596529 | 46701.9 |
| amidohydrolase | DXD04_14985 | Not Available | Negative | 3596545 - 3597468 | 35145.5 |
| aldo/keto reductase | DXD04_14990 | Not Available | Negative | 3597484 - 3598416 | 34820.6 |
| l-rhamnose mutarotase | DXD04_14995 | Not Available | Negative | 3598429 - 3598809 | 15010.2 |
| alpha-l-fucosidase | DXD04_15000 | Not Available | Negative | 3598824 - 3600464 | 62415.9 |
| arac family transcriptional regulator | DXD04_15005 | Not Available | Positive | 3600682 - 3601536 | 33638.5 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_15010 | Not Available | Negative | 3601550 - 3603238 | 63775.3 |
| tonb-dependent receptor | DXD04_15015 | Not Available | Negative | 3603260 - 3606337 | 113178.0 |
| glycoside hydrolase family 97 protein | DXD04_15020 | Not Available | Negative | 3606836 - 3608731 | 71174.3 |
| hypothetical protein | DXD04_15025 | Not Available | Positive | 3609105 - 3610466 | 50651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

