Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | DXD04_14880 | Not Available | Positive | 3571558 - 3572832 | 45462.9 |
| hypothetical protein | DXD04_14885 | Not Available | Positive | 3572836 - 3573771 | 35574.8 |
| deda family protein | DXD04_14890 | Not Available | Positive | 3573747 - 3574211 | 17155.4 |
| metallophosphatase | DXD04_14895 | Not Available | Positive | 3574299 - 3575282 | 36896.9 |
| sam-dependent methyltransferase | DXD04_14900 | Not Available | Positive | 3575335 - 3575997 | 24934.6 |
| zinc abc transporter substrate-binding protein | DXD04_14905 | Not Available | Positive | 3576073 - 3576939 | 32964.4 |
| abc transporter atp-binding protein | DXD04_14910 | Not Available | Positive | 3576955 - 3577722 | 28582.8 |
| duf2723 domain-containing protein | DXD04_14915 | Not Available | Positive | 3577833 - 3581165 | 126931.0 |
| polysaccharide deacetylase family protein | DXD04_14920 | Not Available | Positive | 3581301 - 3581912 | 24302.5 |
| duf4861 domain-containing protein | DXD04_14925 | Not Available | Negative | 3582132 - 3583367 | 45194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

