Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_14830 | Not Available | Positive | 3556008 - 3556616 | 22591.2 |
| hypothetical protein | DXD04_14835 | Not Available | Negative | 3556600 - 3557316 | 26245.2 |
| murein l,d-transpeptidase | DXD04_14840 | Not Available | Negative | 3557417 - 3558454 | 39388.1 |
| yigz family protein | DXD04_14845 | Not Available | Negative | 3558571 - 3559173 | 22850.7 |
| arylsulfatase | DXD04_14850 | Not Available | Positive | 3559277 - 3560803 | 57598.3 |
| is4 family transposase | DXD04_14855 | Not Available | Negative | 3560968 - 3562131 | 45363.8 |
| tonb-dependent receptor | DXD04_14860 | Not Available | Positive | 3562631 - 3565837 | 118893.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_14865 | Not Available | Positive | 3565854 - 3567617 | 65960.7 |
| rna methyltransferase | DXD04_14870 | Not Available | Positive | 3567757 - 3569277 | 58353.9 |
| s9 family peptidase | DXD04_14875 | Not Available | Positive | 3569327 - 3571534 | 83421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

