Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXD04_01415 | Not Available | Negative | 332630 - 334321 | 63667.9 |
| tonb-dependent receptor | DXD04_01420 | Not Available | Negative | 334346 - 337363 | 112380.0 |
| duf1624 domain-containing protein | DXD04_01425 | Not Available | Negative | 337394 - 338461 | 39793.3 |
| alpha-n-acetylglucosaminidase | DXD04_01430 | Not Available | Negative | 338497 - 340665 | 83568.5 |
| mate family efflux transporter | DXD04_01435 | Not Available | Positive | 340843 - 342192 | 49197.0 |
| hypothetical protein | DXD04_01440 | Not Available | Negative | 342196 - 342423 | 8247.78 |
| pyrroline-5-carboxylate reductase | DXD04_01445 | Not Available | Negative | 342479 - 343252 | 27187.0 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DXD04_01450 | Not Available | Negative | 343685 - 344809 | 40947.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DXD04_01455 | Not Available | Negative | 344904 - 345872 | 35941.2 |
| argininosuccinate synthase | DXD04_01460 | Not Available | Negative | 345869 - 347077 | 44976.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

