Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DXD04_14630 | Not Available | Positive | 3506223 - 3507566 | 51465.4 |
| hypothetical protein | DXD04_14635 | Not Available | Positive | 3507582 - 3509630 | 79447.3 |
| n-glycanase | DXD04_14640 | Not Available | Positive | 3509643 - 3510881 | 46164.4 |
| pdz domain-containing protein | DXD04_14645 | Not Available | Negative | 3510965 - 3512467 | 55991.2 |
| hypothetical protein | DXD04_14650 | Not Available | Negative | 3512625 - 3514007 | 50955.2 |
| mate family efflux transporter | DXD04_14655 | Not Available | Positive | 3514223 - 3515545 | 48433.7 |
| signal recognition particle protein | DXD04_14660 | Not Available | Positive | 3515612 - 3516937 | 49069.0 |
| duf1343 domain-containing protein | DXD04_14665 | Not Available | Negative | 3517010 - 3518197 | 44845.4 |
| hd domain-containing protein | DXD04_14670 | Not Available | Positive | 3518249 - 3518785 | 20393.8 |
| lps-assembly protein lptd | DXD04_14675 | Not Available | Positive | 3518875 - 3521616 | 104385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

