Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | DXD04_14530 | Not Available | Negative | 3480699 - 3481364 | 25233.4 |
| duf3298 domain-containing protein | DXD04_14535 | Not Available | Positive | 3481522 - 3482388 | 32146.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DXD04_14540 | Not Available | Positive | 3482395 - 3483021 | 23805.1 |
| mbl fold metallo-hydrolase | DXD04_14545 | Not Available | Positive | 3483027 - 3483668 | 23997.8 |
| glycine dehydrogenase (aminomethyl-transferring) | DXD04_14550 | Not Available | Positive | 3483715 - 3486564 | 104189.0 |
| phenylacetate--coa ligase | DXD04_14555 | Not Available | Positive | 3486839 - 3488137 | 49266.7 |
| amino acid-binding protein | DXD04_14560 | Not Available | Positive | 3488150 - 3488578 | 15834.2 |
| gtra family protein | DXD04_14565 | Not Available | Negative | 3488575 - 3488964 | 15152.0 |
| aspartate--trna ligase | DXD04_14570 | Not Available | Negative | 3489000 - 3490763 | 66588.1 |
| thioredoxin-disulfide reductase | DXD04_14575 | Not Available | Positive | 3490977 - 3491924 | 33688.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

