Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXD04_14480 | Not Available | Positive | 3469192 - 3472128 | 108959.0 |
| duf4876 domain-containing protein | DXD04_14485 | Not Available | Positive | 3472135 - 3473460 | 47993.1 |
| hypothetical protein | DXD04_14490 | Not Available | Positive | 3473463 - 3475067 | 60032.5 |
| abc transporter atp-binding protein | DXD04_14495 | Not Available | Positive | 3475093 - 3475974 | 33848.0 |
| hypothetical protein | DXD04_14500 | Not Available | Positive | 3475979 - 3476653 | 25140.9 |
| duf4857 domain-containing protein | DXD04_14505 | Not Available | Positive | 3476666 - 3477907 | 47275.3 |
| hypothetical protein | DXD04_14510 | Not Available | Positive | 3477926 - 3478471 | 20395.2 |
| peptidase | DXD04_14515 | Not Available | Positive | 3478455 - 3479006 | 20753.5 |
| sugar o-acetyltransferase | DXD04_14520 | Not Available | Negative | 3479223 - 3479786 | 20644.1 |
| hypothetical protein | DXD04_14525 | Not Available | Positive | 3479984 - 3480670 | 26689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

