Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_14380 | Not Available | Positive | 3448109 - 3448543 | 17084.6 |
| molecular chaperone djla | DXD04_14385 | Not Available | Negative | 3448721 - 3449506 | 29357.3 |
| cys-trna(pro) deacylase | DXD04_14390 | Not Available | Negative | 3449533 - 3450015 | 17710.7 |
| excinuclease abc subunit uvra | DXD04_14395 | Not Available | Negative | 3450015 - 3452852 | 105790.0 |
| lysm peptidoglycan-binding domain-containing protein | DXD04_14400 | Not Available | Positive | 3453052 - 3454851 | 68043.0 |
| port family protein | DXD04_14405 | Not Available | Positive | 3454898 - 3455560 | 24905.5 |
| exodeoxyribonuclease iii | DXD04_14410 | Not Available | Positive | 3455566 - 3456324 | 29541.9 |
| diacylglycerol kinase family protein | DXD04_14415 | Not Available | Positive | 3456333 - 3456710 | 13451.7 |
| pap2 family protein | DXD04_14420 | Not Available | Positive | 3456707 - 3457264 | 20205.4 |
| maoc family dehydratase | DXD04_14425 | Not Available | Negative | 3457338 - 3457802 | 17722.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

