Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DXD04_14330 | Not Available | Negative | 3440928 - 3441914 | 38129.4 |
| Trna-lys | Not Available | Not Available | Positive | 3442055 - 3442130 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3442143 - 3442217 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3442243 - 3442314 | Not Available |
| glucose-1-phosphate thymidylyltransferase | DXD04_14350 | Not Available | Positive | 3442508 - 3443401 | 33051.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DXD04_14355 | Not Available | Positive | 3443423 - 3443998 | 22219.3 |
| gnat family n-acetyltransferase | DXD04_14360 | Not Available | Negative | 3444064 - 3445617 | 59994.8 |
| dicarboxylate/amino acid:cation symporter | DXD04_14365 | Not Available | Positive | 3445727 - 3446920 | 42422.5 |
| duf4405 domain-containing protein | DXD04_14370 | Not Available | Negative | 3446929 - 3447357 | 15646.0 |
| crp/fnr family transcriptional regulator | DXD04_14375 | Not Available | Negative | 3447435 - 3447965 | 20899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

