Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna2/cas4 domain-containing protein | DXD04_14180 | Not Available | Positive | 3405812 - 3409039 | 123826.0 |
| pd-(d/e)xk nuclease family protein | DXD04_14185 | Not Available | Positive | 3409078 - 3411951 | 110539.0 |
| hypothetical protein | DXD04_14190 | Not Available | Negative | 3412172 - 3413323 | 44309.5 |
| 1,4-alpha-glucan-branching enzyme | DXD04_14195 | Not Available | Negative | 3413335 - 3415347 | 77899.2 |
| yhch/yjgk/yial family protein | DXD04_14200 | Not Available | Negative | 3415366 - 3415809 | 16412.9 |
| duf2461 domain-containing protein | DXD04_14205 | Not Available | Negative | 3415838 - 3416503 | 25776.6 |
| inositol monophosphatase | DXD04_14210 | Not Available | Negative | 3416577 - 3417359 | 29056.5 |
| phosphatidylinositol-4-phosphate 5-kinase | DXD04_14215 | Not Available | Negative | 3417359 - 3418486 | 42915.2 |
| insulinase family protein | DXD04_14220 | Not Available | Negative | 3418552 - 3419844 | 49280.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DXD04_14225 | Not Available | Negative | 3419841 - 3420602 | 28202.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

