Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | DXD04_14080 | Not Available | Positive | 3382266 - 3383345 | 39472.0 |
| dipeptidase | DXD04_14085 | Not Available | Positive | 3383357 - 3384712 | 50430.3 |
| hypothetical protein | DXD04_14090 | Not Available | Negative | 3384810 - 3385787 | 37356.3 |
| hypothetical protein | DXD04_14095 | Not Available | Negative | 3385886 - 3386509 | 24053.0 |
| hypothetical protein | DXD04_14100 | Not Available | Negative | 3386487 - 3387506 | 38212.8 |
| endonuclease | DXD04_14105 | Not Available | Negative | 3387821 - 3388798 | 36931.3 |
| aminoacyl-histidine dipeptidase | DXD04_14110 | Not Available | Negative | 3388837 - 3390294 | 53364.2 |
| hypothetical protein | DXD04_14115 | Not Available | Positive | 3390439 - 3390666 | 8311.41 |
| omph family outer membrane protein | DXD04_14120 | Not Available | Positive | 3390704 - 3391300 | 22735.2 |
| duf4091 domain-containing protein | DXD04_14125 | Not Available | Negative | 3391377 - 3393155 | 67739.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

