Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusa | DXD04_13980 | Not Available | Negative | 3359877 - 3361136 | 47678.9 |
| ribosome assembly cofactor rimp | DXD04_13985 | Not Available | Negative | 3361139 - 3361603 | 17635.9 |
| Trna-pro | Not Available | Not Available | Positive | 3361778 - 3361850 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 3362014 - 3362086 | Not Available |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_14000 | Not Available | Negative | 3362333 - 3364171 | 69551.0 |
| tonb-dependent receptor | DXD04_14005 | Not Available | Negative | 3364178 - 3367366 | 116778.0 |
| chloride channel protein | DXD04_14010 | Not Available | Negative | 3367896 - 3369173 | 46160.3 |
| udp-glucose 4-epimerase gale | DXD04_14015 | Not Available | Negative | 3369628 - 3370662 | 38062.8 |
| electron transport complex subunit rsxa | DXD04_14020 | Not Available | Negative | 3370837 - 3371439 | 21315.3 |
| electron transport complex subunit e | DXD04_14025 | Not Available | Negative | 3371459 - 3372043 | 20755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

