Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | DXD04_13730 | Not Available | Positive | 3313211 - 3313987 | 29211.4 |
| dna polymerase iii subunit delta | DXD04_13735 | Not Available | Positive | 3313998 - 3315014 | 38845.2 |
| xre family transcriptional regulator | DXD04_13740 | Not Available | Positive | 3315723 - 3316172 | 17174.6 |
| dihydroorotate dehydrogenase electron transfer subunit | DXD04_13745 | Not Available | Positive | 3316267 - 3317043 | 28279.8 |
| dihydroorotate dehydrogenase | DXD04_13750 | Not Available | Positive | 3317031 - 3317942 | 32272.3 |
| hypothetical protein | DXD04_13755 | Not Available | Negative | 3318195 - 3318644 | 17273.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DXD04_13760 | Not Available | Negative | 3318731 - 3319411 | 25813.0 |
| nad-dependent dna ligase liga | DXD04_13765 | Not Available | Positive | 3319485 - 3321485 | 75708.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DXD04_13770 | Not Available | Positive | 3321599 - 3322492 | 32955.3 |
| hypothetical protein | DXD04_13775 | Not Available | Negative | 3322621 - 3323124 | 18866.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

