Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | DXD04_01315 | Not Available | Positive | 310563 - 311903 | 50565.2 |
| Trna-gly | Not Available | Not Available | Positive | 311980 - 312052 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 312069 - 312153 | Not Available |
| carboxypeptidase-like regulatory domain-containing protein | DXD04_01330 | Not Available | Negative | 312269 - 314782 | 98191.5 |
| glpgli family protein | DXD04_01335 | Not Available | Negative | 314795 - 315667 | 33033.8 |
| sensor histidine kinase | DXD04_01340 | Not Available | Positive | 315830 - 317257 | 54247.2 |
| dna-binding response regulator | DXD04_01345 | Not Available | Positive | 317264 - 317941 | 26250.7 |
| j domain-containing protein | DXD04_01350 | Not Available | Negative | 318189 - 319118 | 34859.7 |
| hsp20/alpha crystallin family protein | DXD04_01355 | Not Available | Negative | 319203 - 319634 | 16813.8 |
| lysr family transcriptional regulator | DXD04_01360 | Not Available | Negative | 319919 - 320863 | 35590.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

