Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | DXD04_13680 | Not Available | Positive | 3302564 - 3302941 | 14644.2 |
| duf3805 domain-containing protein | DXD04_13685 | Not Available | Positive | 3302976 - 3303800 | 31092.6 |
| atp-binding cassette domain-containing protein | DXD04_13690 | Not Available | Positive | 3303841 - 3305706 | 72275.5 |
| altronate dehydratase | DXD04_13695 | Not Available | Negative | 3305874 - 3307367 | 54362.9 |
| laci family dna-binding transcriptional regulator | DXD04_13700 | Not Available | Negative | 3307389 - 3308465 | 41319.2 |
| sugar kinase | DXD04_13705 | Not Available | Positive | 3308683 - 3309705 | 37002.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DXD04_13710 | Not Available | Positive | 3309745 - 3310413 | 23929.3 |
| nif3-like dinuclear metal center hexameric protein | DXD04_13715 | Not Available | Positive | 3310597 - 3311691 | 40648.8 |
| hypothetical protein | DXD04_13720 | Not Available | Positive | 3311698 - 3312489 | 30629.0 |
| hypothetical protein | DXD04_13725 | Not Available | Negative | 3312557 - 3313006 | 17618.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

