Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | DXD04_13630 | Not Available | Negative | 3292012 - 3292503 | 18609.4 |
| iron-containing alcohol dehydrogenase | DXD04_13635 | Not Available | Negative | 3292516 - 3293691 | 42940.7 |
| formate--tetrahydrofolate ligase | DXD04_13640 | Not Available | Positive | 3293781 - 3295448 | 60299.0 |
| cobyrinate a,c-diamide synthase | DXD04_13645 | Not Available | Positive | 3295453 - 3296775 | 49363.4 |
| Trna-gly | Not Available | Not Available | Positive | 3296870 - 3296945 | Not Available |
| hypothetical protein | DXD04_13655 | Not Available | Positive | 3297122 - 3297676 | 22126.7 |
| transcription termination factor rho | DXD04_13660 | Not Available | Negative | 3297810 - 3299837 | 74792.4 |
| rida family protein | DXD04_13665 | Not Available | Positive | 3300135 - 3300512 | 13280.1 |
| hypothetical protein | DXD04_13670 | Not Available | Positive | 3300589 - 3301797 | 45661.5 |
| mbl fold metallo-hydrolase | DXD04_13675 | Not Available | Positive | 3301810 - 3302556 | 28526.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

