Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXD04_13580 | Not Available | Negative | 3276012 - 3278666 | 99962.0 |
| histidine-type phosphatase | DXD04_13585 | Not Available | Negative | 3278832 - 3280118 | 49427.1 |
| transcription-repair coupling factor | DXD04_13590 | Not Available | Negative | 3280252 - 3283620 | 127792.0 |
| tonb-dependent receptor | DXD04_13595 | Not Available | Negative | 3283705 - 3286137 | 92937.2 |
| hypothetical protein | DXD04_13600 | Not Available | Negative | 3286127 - 3287092 | 36344.0 |
| rna polymerase sigma-70 factor | DXD04_13605 | Not Available | Negative | 3287097 - 3287654 | 21023.3 |
| hypothetical protein | DXD04_13610 | Not Available | Negative | 3287680 - 3288309 | 22254.7 |
| hypothetical protein | DXD04_13615 | Not Available | Negative | 3288329 - 3288523 | 7486.73 |
| tetratricopeptide repeat protein | DXD04_13620 | Not Available | Positive | 3288628 - 3290790 | 84535.1 |
| type ii pantothenate kinase | DXD04_13625 | Not Available | Negative | 3290836 - 3291672 | 29846.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

