Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence hypothetical protein | DXD04_13475 | Not Available | Negative | 3253487 - 3253640 | 5765.67 |
| hypothetical protein | DXD04_13480 | Not Available | Positive | 3253804 - 3254493 | 26409.6 |
| duf2971 domain-containing protein | DXD04_13485 | Not Available | Positive | 3254494 - 3255294 | 31486.7 |
| hypothetical protein | DXD04_13490 | Not Available | Negative | 3255260 - 3255625 | 13433.4 |
| hypothetical protein | DXD04_13495 | Not Available | Negative | 3255612 - 3255851 | 9174.03 |
| duf1016 domain-containing protein | DXD04_13500 | Not Available | Negative | 3255817 - 3256935 | 43333.8 |
| sam-dependent dna methyltransferase | DXD04_13505 | Not Available | Negative | 3256928 - 3258589 | 62167.7 |
| type i restriction endonuclease subunit r | DXD04_13510 | Not Available | Negative | 3258601 - 3261837 | 125984.0 |
| hypothetical protein | DXD04_13515 | Not Available | Negative | 3261847 - 3262290 | 17835.3 |
| xre family transcriptional regulator | DXD04_13520 | Not Available | Negative | 3262357 - 3262554 | 7632.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

