Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | DXD04_13425 | Not Available | Negative | 3244144 - 3244839 | 26780.1 |
| ompa family protein | DXD04_13430 | Not Available | Negative | 3244920 - 3245636 | 24344.8 |
| serine hydroxymethyltransferase | DXD04_13435 | Not Available | Negative | 3245661 - 3246941 | 47020.6 |
| port family protein | DXD04_13440 | Not Available | Negative | 3246972 - 3247709 | 27795.6 |
| flavin reductase family protein | DXD04_13445 | Not Available | Negative | 3247717 - 3248283 | 21111.7 |
| aspartate carbamoyltransferase regulatory subunit | DXD04_13450 | Not Available | Negative | 3248287 - 3248745 | 17401.2 |
| aspartate carbamoyltransferase | DXD04_13455 | Not Available | Negative | 3248773 - 3249714 | 36230.6 |
| penicillin-binding protein | DXD04_13460 | Not Available | Positive | 3249908 - 3252235 | 88533.9 |
| upxy family transcription antiterminator | DXD04_13465 | Not Available | Negative | 3252322 - 3252837 | 20075.7 |
| nad-dependent epimerase/dehydratase family protein | DXD04_13470 | Not Available | Negative | 3252843 - 3253486 | 24215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

