Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_13375 | Not Available | Positive | 3233422 - 3233883 | 17407.0 |
| n-acetyltransferase | DXD04_13380 | Not Available | Positive | 3233891 - 3234406 | 19022.8 |
| Trna-pro | Not Available | Not Available | Positive | 3234655 - 3234732 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 3234767 - 3234841 | Not Available |
| s9 family peptidase | DXD04_13395 | Not Available | Negative | 3235001 - 3237091 | 78983.9 |
| ion transporter | DXD04_13400 | Not Available | Negative | 3237151 - 3238041 | 34251.5 |
| membrane protein insertase yidc | DXD04_13405 | Not Available | Negative | 3238172 - 3240031 | 71305.1 |
| ctp synthase | DXD04_13410 | Not Available | Negative | 3240061 - 3241659 | 60113.3 |
| duf3078 domain-containing protein | DXD04_13415 | Not Available | Positive | 3242001 - 3243482 | 57120.9 |
| trimeric intracellular cation channel family protein | DXD04_13420 | Not Available | Positive | 3243511 - 3244128 | 22475.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

