Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_13275 | Not Available | Positive | 3212982 - 3213512 | 21076.8 |
| glycoside hydrolase family 28 protein | DXD04_13280 | Not Available | Positive | 3213612 - 3215147 | 56879.4 |
| gtp-binding protein | DXD04_13285 | Not Available | Negative | 3215244 - 3216494 | 48027.9 |
| iron-sulfur cluster repair di-iron protein | DXD04_13290 | Not Available | Positive | 3216668 - 3217396 | 27688.5 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DXD04_13295 | Not Available | Negative | 3217466 - 3218650 | 44011.6 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DXD04_13300 | Not Available | Negative | 3218679 - 3220097 | 53852.5 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DXD04_13305 | Not Available | Negative | 3220112 - 3221158 | 39328.5 |
| 4fe-4s dicluster domain-containing protein | DXD04_13310 | Not Available | Negative | 3221163 - 3222638 | 54783.4 |
| fha domain-containing protein | DXD04_13315 | Not Available | Negative | 3222701 - 3223240 | 20297.4 |
| spor domain-containing protein | DXD04_13320 | Not Available | Negative | 3223260 - 3224381 | 41100.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

