Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine carbamoyltransferase | DXD04_13220 | Not Available | Positive | 3202118 - 3203080 | 36441.6 |
| rhodanese-like domain-containing protein | DXD04_13225 | Not Available | Negative | 3203162 - 3203560 | 14904.8 |
| hypothetical protein | DXD04_13230 | Not Available | Negative | 3203571 - 3204236 | 24841.6 |
| acyltransferase | DXD04_13235 | Not Available | Negative | 3204233 - 3205387 | 44253.2 |
| d-alanine--d-alanine ligase | DXD04_13240 | Not Available | Negative | 3205424 - 3206401 | 36054.2 |
| rlua family pseudouridine synthase | DXD04_13245 | Not Available | Negative | 3206407 - 3207477 | 40707.7 |
| pasta domain-containing protein | DXD04_13250 | Not Available | Negative | 3207500 - 3208150 | 24073.1 |
| rna polymerase sigma factor | DXD04_13255 | Not Available | Positive | 3208409 - 3208987 | 22523.3 |
| beta-glucosidase | DXD04_13260 | Not Available | Negative | 3209046 - 3211508 | 92035.2 |
| endonuclease | DXD04_13270 | Not Available | Positive | 3212345 - 3212943 | 23205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

