Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | DXD04_01265 | Not Available | Negative | 300197 - 300667 | 17449.3 |
| nudix domain-containing protein | DXD04_01270 | Not Available | Positive | 300942 - 301472 | 19847.7 |
| tetratricopeptide repeat protein | DXD04_01275 | Not Available | Positive | 301481 - 304498 | 114721.0 |
| tonb-dependent receptor | DXD04_01280 | Not Available | Positive | 304500 - 306161 | 62311.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DXD04_01285 | Not Available | Negative | 306164 - 307204 | 38676.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | DXD04_01290 | Not Available | Positive | 307237 - 308079 | 32011.3 |
| recx family transcriptional regulator | DXD04_01295 | Not Available | Positive | 308076 - 308555 | 19105.0 |
| comf family protein | DXD04_01300 | Not Available | Positive | 308539 - 309228 | 25629.3 |
| orotate phosphoribosyltransferase | DXD04_01305 | Not Available | Positive | 309330 - 309965 | 23330.3 |
| srpbcc family protein | DXD04_01310 | Not Available | Positive | 310094 - 310522 | 16384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

