Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubredoxin | DXD04_13165 | Not Available | Positive | 3187858 - 3188022 | 5952.92 |
| hypothetical protein | DXD04_13170 | Not Available | Negative | 3188094 - 3189890 | 69001.0 |
| laci family dna-binding transcriptional regulator | DXD04_13175 | Not Available | Positive | 3190103 - 3191188 | 41189.3 |
| sdr family oxidoreductase | DXD04_13180 | Not Available | Positive | 3191194 - 3192009 | 28990.1 |
| mannonate dehydratase | DXD04_13185 | Not Available | Positive | 3192040 - 3193218 | 45114.1 |
| duf4981 domain-containing protein | DXD04_13195 | Not Available | Negative | 3195490 - 3198603 | 118564.0 |
| lytic transglycosylase domain-containing protein | DXD04_13200 | Not Available | Negative | 3198643 - 3199611 | 36865.9 |
| hypothetical protein | DXD04_13205 | Not Available | Negative | 3199905 - 3200372 | 17374.4 |
| duf2007 domain-containing protein | DXD04_13210 | Not Available | Negative | 3200369 - 3200596 | 8207.86 |
| glutamate-5-semialdehyde dehydrogenase | DXD04_13215 | Not Available | Positive | 3200795 - 3202045 | 45369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

