Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2807 domain-containing protein | DXD04_13065 | Not Available | Negative | 3161701 - 3162327 | 22304.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXD04_13070 | Not Available | Negative | 3162341 - 3163591 | 47984.5 |
| tolc family protein | DXD04_13075 | Not Available | Negative | 3163617 - 3164987 | 52101.1 |
| sigma-54-dependent fis family transcriptional regulator | DXD04_13080 | Not Available | Positive | 3165200 - 3166573 | 51561.8 |
| pas domain-containing sensor histidine kinase | DXD04_13085 | Not Available | Positive | 3166563 - 3167867 | 48920.4 |
| hypothetical protein | DXD04_13090 | Not Available | Negative | 3167942 - 3168388 | 17049.7 |
| naat family transporter | DXD04_13095 | Not Available | Negative | 3168556 - 3169200 | 23827.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DXD04_13100 | Not Available | Negative | 3169667 - 3171508 | 68465.1 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DXD04_13105 | Not Available | Negative | 3171513 - 3172022 | 17675.0 |
| glycine cleavage system protein gcvh | DXD04_13110 | Not Available | Negative | 3172041 - 3172421 | 14157.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

