Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | DXD04_13015 | Not Available | Negative | 3148350 - 3149177 | 31513.0 |
| holliday junction branch migration protein ruva | DXD04_13020 | Not Available | Negative | 3149406 - 3150002 | 21290.1 |
| diaminopimelate dehydrogenase | DXD04_13025 | Not Available | Positive | 3150174 - 3151073 | 32254.9 |
| sdr family nad(p)-dependent oxidoreductase | DXD04_13030 | Not Available | Negative | 3151142 - 3151987 | 31357.4 |
| nadh:flavin oxidoreductase | DXD04_13035 | Not Available | Negative | 3151989 - 3153212 | 45360.3 |
| duf1295 domain-containing protein | DXD04_13040 | Not Available | Negative | 3153227 - 3153994 | 29213.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DXD04_13045 | Not Available | Negative | 3154216 - 3156060 | 66752.8 |
| superoxide dismutase | DXD04_13050 | Not Available | Positive | 3156271 - 3156843 | 21847.0 |
| abc transporter permease | DXD04_13055 | Not Available | Negative | 3156916 - 3159273 | 88569.0 |
| abc transporter permease | DXD04_13060 | Not Available | Negative | 3159305 - 3161665 | 88970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

