Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3256 family protein | DXD04_12965 | Not Available | Negative | 3130968 - 3131636 | 25126.1 |
| response regulator | DXD04_12970 | Not Available | Negative | 3131707 - 3134481 | 104179.0 |
| carbohydrate kinase | DXD04_12975 | Not Available | Negative | 3134607 - 3135491 | 32184.9 |
| mfs transporter | DXD04_12980 | Not Available | Negative | 3135502 - 3136665 | 41847.7 |
| duf4980 domain-containing protein | DXD04_12985 | Not Available | Negative | 3136808 - 3138619 | 68463.3 |
| duf4960 domain-containing protein | DXD04_12990 | Not Available | Negative | 3138632 - 3140203 | 56426.2 |
| duf4975 domain-containing protein | DXD04_12995 | Not Available | Negative | 3140237 - 3141817 | 59200.0 |
| duf4960 domain-containing protein | DXD04_13000 | Not Available | Negative | 3141836 - 3143242 | 51840.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_13005 | Not Available | Negative | 3143264 - 3144997 | 65562.1 |
| tonb-dependent receptor | DXD04_13010 | Not Available | Negative | 3145023 - 3148130 | 115073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

