Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_12910 | Not Available | Negative | 3119338 - 3119721 | 15064.6 |
| Trna-met | Not Available | Not Available | Positive | 3120041 - 3120117 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3120173 - 3120249 | Not Available |
| malate dehydrogenase | DXD04_12925 | Not Available | Positive | 3120803 - 3121804 | 35710.9 |
| pap2 family protein | DXD04_12930 | Not Available | Positive | 3122109 - 3123593 | 55798.1 |
| dna primase | DXD04_12935 | Not Available | Positive | 3123645 - 3125774 | 81216.8 |
| gtp cyclohydrolase i fole | DXD04_12940 | Not Available | Negative | 3125824 - 3126417 | 22679.7 |
| spor domain-containing protein | DXD04_12945 | Not Available | Negative | 3126420 - 3126878 | 17218.9 |
| duf1599 domain-containing protein | DXD04_12955 | Not Available | Negative | 3129090 - 3129632 | 20830.2 |
| lysm peptidoglycan-binding domain-containing protein | DXD04_12960 | Not Available | Negative | 3129777 - 3130685 | 33959.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

