Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | DXD04_12860 | Not Available | Positive | 3107583 - 3108047 | 17916.0 |
| 50s ribosomal protein l19 | DXD04_12865 | Not Available | Negative | 3108371 - 3108724 | 13103.2 |
| 5'-nucleotidase | DXD04_12870 | Not Available | Positive | 3108952 - 3109734 | 27887.7 |
| bifunctional metallophosphatase/5'-nucleotidase | DXD04_12875 | Not Available | Positive | 3109749 - 3110591 | 31471.0 |
| beta-n-acetylglucosaminidase | DXD04_12880 | Not Available | Positive | 3110606 - 3113575 | 110507.0 |
| 4fe-4s dicluster domain-containing protein | DXD04_12885 | Not Available | Positive | 3113697 - 3113864 | 5631.56 |
| pyridoxal phosphate-dependent aminotransferase | DXD04_12890 | Not Available | Negative | 3114141 - 3115334 | 43444.2 |
| bax inhibitor (bi)-1/ycca family protein | DXD04_12895 | Not Available | Negative | 3115419 - 3116120 | 25985.7 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DXD04_12900 | Not Available | Negative | 3116137 - 3117351 | 44881.1 |
| yjgp/yjgq family permease | DXD04_12905 | Not Available | Negative | 3117368 - 3119260 | 72511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

