Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | DXD04_12810 | Not Available | Negative | 3099814 - 3100794 | 35302.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DXD04_12815 | Not Available | Negative | 3100873 - 3101736 | 32577.2 |
| (d)cmp kinase | DXD04_12820 | Not Available | Negative | 3101723 - 3102421 | 26291.5 |
| energy transducer tonb | DXD04_12825 | Not Available | Positive | 3102839 - 3103528 | 25991.3 |
| polyprenyl synthetase family protein | DXD04_12830 | Not Available | Positive | 3103606 - 3104589 | 37407.7 |
| tatd family deoxyribonuclease | DXD04_12835 | Not Available | Positive | 3104594 - 3105385 | 29812.8 |
| Trna-ser | Not Available | Not Available | Positive | 3105522 - 3105612 | Not Available |
| mota/tolq/exbb proton channel family protein | DXD04_12845 | Not Available | Positive | 3105676 - 3106476 | 28432.3 |
| hypothetical protein | DXD04_12850 | Not Available | Positive | 3106485 - 3106952 | 16589.0 |
| biopolymer transporter exbd | DXD04_12855 | Not Available | Positive | 3106993 - 3107580 | 22288.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

