Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DXD04_12760 | Not Available | Negative | 3083773 - 3084576 | 30480.1 |
| upf0104 family protein | DXD04_12765 | Not Available | Positive | 3084652 - 3085659 | 37348.6 |
| aminoacyl-histidine dipeptidase | DXD04_12770 | Not Available | Positive | 3085695 - 3087152 | 53458.8 |
| alpha-2-macroglobulin | DXD04_12775 | Not Available | Positive | 3087335 - 3092947 | 211907.0 |
| duf1573 domain-containing protein | DXD04_12780 | Not Available | Positive | 3093089 - 3094174 | 39955.7 |
| methylmalonyl co-a mutase-associated gtpase meab | DXD04_12785 | Not Available | Positive | 3094183 - 3095289 | 40789.9 |
| polyamine abc transporter atp-binding protein | DXD04_12790 | Not Available | Positive | 3095410 - 3096810 | 52537.5 |
| abc transporter permease | DXD04_12795 | Not Available | Positive | 3096807 - 3097604 | 29810.1 |
| abc transporter permease | DXD04_12800 | Not Available | Positive | 3097598 - 3098389 | 28702.2 |
| extracellular solute-binding protein | DXD04_12805 | Not Available | Positive | 3098398 - 3099726 | 51060.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

