Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | DXD04_12605 | Not Available | Positive | 3043609 - 3045012 | 53439.1 |
| duf4488 domain-containing protein | DXD04_12610 | Not Available | Positive | 3045160 - 3045651 | 18678.6 |
| 50s ribosomal protein l13 | DXD04_12615 | Not Available | Positive | 3045936 - 3046397 | 16946.8 |
| 30s ribosomal protein s9 | DXD04_12620 | Not Available | Positive | 3046404 - 3046790 | 14481.8 |
| 30s ribosomal protein s2 | DXD04_12625 | Not Available | Positive | 3047000 - 3047839 | 30619.1 |
| elongation factor ts | DXD04_12630 | Not Available | Positive | 3047961 - 3048953 | 35547.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DXD04_12635 | Not Available | Positive | 3049142 - 3050656 | 55758.1 |
| 50s ribosomal protein l34 | DXD04_12640 | Not Available | Negative | 3050852 - 3051013 | 6201.58 |
| elongation factor p | DXD04_12645 | Not Available | Positive | 3051204 - 3051770 | 21333.6 |
| beta-xylosidase | DXD04_12650 | Not Available | Negative | 3051847 - 3053448 | 61184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

