Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4832 domain-containing protein | DXD04_12505 | Not Available | Positive | 3009038 - 3010672 | 62701.4 |
| fad-dependent oxidoreductase | DXD04_12510 | Not Available | Positive | 3010674 - 3012542 | 70105.0 |
| alpha-galactosidase | DXD04_12515 | Not Available | Positive | 3012605 - 3014686 | 79683.4 |
| acetylxylan esterase | DXD04_12520 | Not Available | Positive | 3014688 - 3015986 | 48847.2 |
| glycoside hydrolase family 2 | DXD04_12525 | Not Available | Positive | 3015988 - 3017778 | 69326.0 |
| duf4886 domain-containing protein | DXD04_12530 | Not Available | Positive | 3017775 - 3020783 | 112390.0 |
| glycoside hydrolase family 2 protein | DXD04_12535 | Not Available | Positive | 3020793 - 3023228 | 91920.4 |
| sam-dependent methyltransferase | DXD04_12540 | Not Available | Positive | 3023472 - 3024671 | 44846.3 |
| abc transporter atp-binding protein | DXD04_12545 | Not Available | Positive | 3025082 - 3025759 | 25054.3 |
| abc transporter permease | DXD04_12550 | Not Available | Positive | 3025772 - 3028147 | 89146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

