Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | DXD04_12450 | Not Available | Positive | 2998206 - 2998985 | 29253.6 |
| type i asparaginase | DXD04_12455 | Not Available | Positive | 2999072 - 3000121 | 38822.0 |
| dna-binding response regulator | DXD04_12460 | Not Available | Positive | 3000225 - 3000911 | 26222.0 |
| two-component sensor histidine kinase | DXD04_12465 | Not Available | Positive | 3000929 - 3002716 | 69006.0 |
| hypothetical protein | DXD04_12470 | Not Available | Negative | 3002752 - 3002994 | 9006.42 |
| hypothetical protein | DXD04_12475 | Not Available | Positive | 3003590 - 3004387 | 30122.6 |
| hypothetical protein | DXD04_12480 | Not Available | Positive | 3004438 - 3004935 | 18710.9 |
| hypothetical protein | DXD04_12485 | Not Available | Positive | 3004948 - 3006057 | 42212.2 |
| hypothetical protein | DXD04_12490 | Not Available | Positive | 3006104 - 3006957 | 32073.0 |
| duf4832 domain-containing protein | DXD04_12500 | Not Available | Positive | 3007519 - 3009030 | 58619.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

