Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyloxyacyl hydrolase | DXD04_12400 | Not Available | Negative | 2988259 - 2989491 | 45496.5 |
| hypothetical protein | DXD04_12405 | Not Available | Negative | 2989478 - 2990473 | 37508.2 |
| 50s ribosomal protein l11 methyltransferase | DXD04_12410 | Not Available | Positive | 2990660 - 2991505 | 31394.2 |
| dna alkylation repair protein | DXD04_12415 | Not Available | Negative | 2991535 - 2992245 | 27788.7 |
| tryptophan synthase subunit beta | DXD04_12420 | Not Available | Positive | 2992557 - 2993753 | 43823.7 |
| anthranilate synthase component i family protein | DXD04_12425 | Not Available | Positive | 2993766 - 2995166 | 52684.2 |
| aminodeoxychorismate/anthranilate synthase component ii | DXD04_12430 | Not Available | Positive | 2995173 - 2995739 | 21005.2 |
| anthranilate phosphoribosyltransferase | DXD04_12435 | Not Available | Positive | 2995782 - 2996777 | 36398.9 |
| indole-3-glycerol phosphate synthase trpc | DXD04_12440 | Not Available | Positive | 2996785 - 2997573 | 28864.0 |
| phosphoribosylanthranilate isomerase | DXD04_12445 | Not Available | Positive | 2997570 - 2998193 | 23238.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

