Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DXD04_12350 | Not Available | Negative | 2976296 - 2977939 | 59858.8 |
| hypothetical protein | DXD04_12355 | Not Available | Negative | 2978044 - 2978280 | 9246.14 |
| hypothetical protein | DXD04_12360 | Not Available | Negative | 2978294 - 2980603 | 89509.3 |
| rna methyltransferase | DXD04_12365 | Not Available | Positive | 2980708 - 2981466 | 27922.7 |
| hypothetical protein | DXD04_12370 | Not Available | Negative | 2981461 - 2981787 | 12687.2 |
| duf4296 domain-containing protein | DXD04_12375 | Not Available | Negative | 2981793 - 2982653 | 32895.5 |
| lipoprotein signal peptidase | DXD04_12380 | Not Available | Negative | 2982650 - 2983300 | 24618.2 |
| trar/dksa family transcriptional regulator | DXD04_12385 | Not Available | Negative | 2983421 - 2983801 | 14347.1 |
| isoleucine--trna ligase | DXD04_12390 | Not Available | Negative | 2983865 - 2987353 | 132166.0 |
| thiol peroxidase | DXD04_12395 | Not Available | Positive | 2987685 - 2988239 | 19803.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

