Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DXD04_12295 | Not Available | Negative | 2963153 - 2964325 | 44873.3 |
| site-specific integrase | DXD04_12305 | Not Available | Negative | 2964877 - 2965806 | 35899.1 |
| duf262 domain-containing protein | DXD04_12310 | Not Available | Negative | 2965869 - 2967041 | 44902.3 |
| hypothetical protein | DXD04_12315 | Not Available | Negative | 2966977 - 2967201 | 9015.64 |
| dna methyltransferase | DXD04_12320 | Not Available | Negative | 2967407 - 2968591 | 45646.2 |
| xre family transcriptional regulator | DXD04_12325 | Not Available | Negative | 2968619 - 2968819 | 7505.33 |
| class c beta-lactamase-related serine hydrolase | DXD04_12330 | Not Available | Negative | 2969153 - 2970313 | 44559.3 |
| rlua family pseudouridine synthase | DXD04_12335 | Not Available | Positive | 2970543 - 2972162 | 61738.1 |
| atp-dependent chaperone clpb | DXD04_12340 | Not Available | Positive | 2972516 - 2975104 | 97267.7 |
| glycoside hydrolase family 25 protein | DXD04_12345 | Not Available | Negative | 2975219 - 2976133 | 35745.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

