Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | DXD04_12245 | Not Available | Positive | 2949709 - 2951034 | 49411.2 |
| diaminopimelate decarboxylase | DXD04_12250 | Not Available | Positive | 2951142 - 2952302 | 42799.5 |
| hypothetical protein | DXD04_12255 | Not Available | Negative | 2952314 - 2954509 | 85087.9 |
| crp/fnr family transcriptional regulator | DXD04_12260 | Not Available | Positive | 2954622 - 2955323 | 26647.5 |
| duf3667 domain-containing protein | DXD04_12265 | Not Available | Positive | 2955384 - 2956865 | 58245.1 |
| tigr03905 family tscpd domain-containing protein | DXD04_12270 | Not Available | Negative | 2956956 - 2957195 | 8540.48 |
| yebc/pmpr family dna-binding regulatory protein | DXD04_12275 | Not Available | Negative | 2957301 - 2958038 | 27740.6 |
| phenylalanine--trna ligase subunit beta | DXD04_12280 | Not Available | Negative | 2958079 - 2960541 | 90733.7 |
| replicative dna helicase | DXD04_12285 | Not Available | Negative | 2960643 - 2962205 | 58165.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DXD04_12290 | Not Available | Positive | 2962308 - 2963132 | 30881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

